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PRRT2

The PRRT2 gene is located on chromosome 16p11. 2 and contains four exons. The PRRT2 protein is a type II transmembrane protein of proline-rich region (PRD) encoded by three exons (2 ~ 4 extrons) and consists of 340 amino acids in length.
Rossi (2016) confirmed the new topology of PRRT2 protein by in vivo immunolabeling, immunocolloidal gold electron microscopy, cell surface biotinylation, and computer modeling: N-terminal (1-268 aa) localization of the PRD domain In the cytoplasm, the short C-terminus of only 2 amino acids is extracellular, separated by a cytoplasmic ring of approximately 28 amino acids (290-317 aa). Although similar to other members of the Dispanins family, the PRRT2 protein differs in that only the second hydrophobic fragment (M2) actually crosses the plasma membrane, while the first hydrophobic fragment (M1) is due to approximately 279 proline in between. The appearance of the α-helix produces a back-folding that destroys the α-helix structure, thus forming a Helix-loop-helix structure, which mainly binds to the inner surface of the plasma membrane, and the result is that M1 does not cross.
The PRRT2 gene-encoded protein is highly conserved. By DNAMAN V6 multiple sequence alignment, the sequence similarity of the C-terminal domain increased to more than 90% in mammals, especially the two hydrophobic domains (M1 and M2) were extremely conserved.
Recent studies have confirmed that PRRT2 is a presynaptic membrane protein that is enriched in presynaptic terminals and begins to express at the onset of embryonic synapses, with peak expression during postnatal synapse formation and rearrangement. In addition to interacting with SNAP25, it interacts with the rapidly synchronizing release of the Ca2+ receptor synaptotagmin (Syt) 1/2 (a synaptic binding protein) and confers Ca2+ sensitivity to the SNARE complex, thereby promoting the synaptic vesicle cells. Spit process. Moreover, in primary neurons cultured in vitro, knockdown of the expression level of PRRT2 results in a decrease in the number of synapses, changes in the ultrastructure of synapses, and severely impair the formation of synaptic connections.
Protein class

Disease related genes, Human disease related genes, Metabolic proteins, Potential drug targets, Transporters

Predicted location

Intracellular, Membrane (different isoforms)

Single cell type specificity

Cell type enhanced (Bipolar cells, Peritubular cells, Rod photoreceptor cells, Leydig cells, Cone photoreceptor cells)

Immune cell specificity

Immune cell enriched (NK-cell)

Cell line specificity

Cell line enhanced (AF22, HeLa, hTERT-RPE1, REH, U-138 MG)

Interaction

Component of the outer core of AMPAR complex (PubMed:25915028). AMPAR complex consists of an inner core made of 4 pore-forming GluA/GRIA proteins (GRIA1, GRIA2, GRIA3 and GRIA4) and 4 major auxiliary subunits arranged in a twofold symmetry. One of the two pairs of distinct binding sites is occupied either by CNIH2, CNIH3 or CACNG2, CACNG3. The other harbors CACNG2, CACNG3, CACNG4, CACNG8 or GSG1L. This inner core of AMPAR complex is complemented by outer core constituents binding directly to the GluA/GRIA proteins at sites distinct from the interaction sites of the inner core constituents. Outer core constituents include at least PRRT1, PRRT2, CKAMP44/SHISA9, FRRS1L and NRN1. The proteins of the inner and outer core serve as a platform for other, more peripherally associated AMPAR constituents. Alone or in combination, these auxiliary subunits control the gating and pharmacology of the AMPAR complex and profoundly impact their biogenesis and protein processing (By similarity). Interacts with intersectin 1/ITSN1 (By similarity). Interacts with SNARE complex components, including SNAP25, STX1A, SYT1 and SYT2; this interaction may inhibit SNARE complex formation (PubMed:25915028, 22832103).

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