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CDH13

This gene encodes a member of the cadherin superfamily. The encoded protein is localized to the surface of the cell membrane and is anchored by a GPI moiety, rather than by a transmembrane domain. The protein lacks the cytoplasmic domain characteristic of other cadherins, and so is not thought to be a cell-cell adhesion glycoprotein. This protein acts as a negative regulator of axon growth during neural differentiation. It also protects vascular endothelial cells from apoptosis due to oxidative stress, and is associated with resistance to atherosclerosis. The gene is hypermethylated in many types of cancer. Alternative splicing results in multiple transcript variants encoding different isoforms.
Protein class

Plasma proteins

Predicted location

Intracellular

Single cell type specificity

Group enriched (Inhibitory neurons, Oligodendrocyte precursor cells, Excitatory neurons)

Immune cell specificity

Immune cell enhanced (non-classical monocyte)

Cell line specificity

Cell line enhanced (LHCN-M2, U-138 MG, U-87 MG)

Interaction

By contrast to classical cadherins, homodimerization in trans is not mediated by cadherin EC1 domain strand-swapping, but instead through a homophilic adhesive interface which joins two elongated EC1-EC2 domains through a region near their Ca2+-binding sites to form a tetrahedral, X-like shape.

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